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Feature Selection Benchmark Datasets (HRLFS)

This repository hosts the 21 benchmark datasets used in our ACM TKDD paper:

Comprehend, Divide, and Conquer: Feature Subspace Exploration via Multi-Agent Hierarchical Reinforcement Learning Weiliang Zhang, Xiaohan Huang, Yi Du, Ziyue Qiao, Qingqing Long, Zhen Meng, Yuanchun Zhou, Meng Xiao ACM Transactions on Knowledge Discovery from Data (TKDD), 2026

Dataset Summary

The 21 datasets are publicly available and collected from the Feature Selection Benchmark, NCBI Gene Expression Omnibus (GEO), UCI, Kaggle, OpenML, libSVM, etc. They cover three task types — binary classification (C), multi-class classification (MC), and regression (R) — and span diverse fields including biology, finance, image, and synthetic data. Sample sizes range from 253 to 83,733 and feature dimensions from 21 to 20,670.

Dataset Task #Samples #Features File
SpectF C 267 44 spectf.hdf
SVMGuide3 C 1,243 21 svmguide3.hdf
German Credit C 1,001 24 german_credit.hdf
Credit Default C 30,000 25 credit_default.hdf
SpamBase C 4,601 57 spam_base.hdf
Megawatt1 C 253 38 megawatt1.hdf
Ionosphere C 351 34 ionosphere.hdf
Mice-Protein MC 1,080 77 mice_protein.hdf
Coil-20 MC 1,440 400 coil-20.hdf
MNIST MC 10,000 784 mnist.hdf
Otto MC 61,878 93 otto.hdf
Jannis MC 83,733 54 jannis.hdf
Cao MC 4,186 13,488 cao.hdf
Han MC 2,746 20,670 han.hdf
Openml_586 R 1,000 25 openml_586.hdf
Openml_589 R 1,000 25 openml_589.hdf
Openml_607 R 1,000 50 openml_607.hdf
Openml_616 R 500 50 openml_616.hdf
Openml_618 R 1,000 50 openml_618.hdf
Openml_620 R 1,000 25 openml_620.hdf
Openml_637 R 500 50 openml_637.hdf

Data Format

Each dataset is stored as a single HDF5 file with two keys:

  • raw_train — training split (80% of samples)
  • raw_test — test split (20% of samples)

Each key stores a pandas.DataFrame where the last column is the label and all preceding columns are features.

Usage

Download the files with huggingface_hub and load them with pandas:

import pandas as pd
from huggingface_hub import hf_hub_download

path = hf_hub_download(
    repo_id="Shaow/Feature_Selection_Dataset",
    filename="spam_base.hdf",
    repo_type="dataset",
)

train = pd.read_hdf(path, key="raw_train")
test = pd.read_hdf(path, key="raw_test")

X_train, y_train = train.iloc[:, :-1].to_numpy(), train.iloc[:, -1].to_numpy()
X_test, y_test = test.iloc[:, :-1].to_numpy(), test.iloc[:, -1].to_numpy()

To reproduce the experiments in the paper, place the .hdf files under the ./data directory of the HARLFS repository and run, e.g.:

python HRLFS.py --dataset spam_base

Note: reading these files requires pandas and tables (PyTables): pip install pandas tables.

Licensing

All datasets are redistributed from publicly available sources (Feature Selection Benchmark, NCBI GEO, UCI, Kaggle, OpenML, libSVM). Please refer to the original sources for their respective license terms; this collection is provided for research purposes only.

Citation

If you use these datasets, please cite our paper:

@article{zhang2026comprehend,
  title={Comprehend, Divide, and Conquer: Feature Subspace Exploration via Multi-Agent Hierarchical Reinforcement Learning},
  author={Zhang, Weiliang and Huang, Xiaohan and Du, Yi and Qiao, Ziyue and Long, Qingqing and Meng, Zhen and Zhou, Yuanchun and Xiao, Meng},
  journal={ACM Transactions on Knowledge Discovery from Data},
  year={2026}
}

Contact

For questions, please contact the corresponding author: Meng Xiao (shaow@cnic.cn).

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